miRBase entry: nta-MIR169p

Stem-loop nta-MIR169p


Accession
MI0021371
Description
Nicotiana tabacum nta-MIR169p precursor miRNA
Gene family
MIPF0000037; MIR169_2

Literature search
4 open access papers mention nta-MIR169p
(15 sentences)

Sequence

gaguggauugCAGCCAAGGAUGACUUGCCGAgauguuguagccaaugcaacgacuuaucggcaggucguccuuggcuacauuucacucuuu
(((((((.((.((((((((((((((((((((...(((((.((....)).)))))...)))))))))))))))))))).)).)))))))...

Structure
---       u  C                    gau     a  c 
   gagugga ug AGCCAAGGAUGACUUGCCGA   guugu gc a
   ||||||| || ||||||||||||||||||||   ||||| ||  
   cucacuu ac ucgguuccugcuggacggcu   cagca cg a
uuu       u  a                    auu     a  u 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature nta-miR169p

Accession MIMAT0024681
Description Nicotiana tabacum nta-miR169p mature miRNA
Sequence 11 - CAGCCAAGGAUGACUUGCCGA - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22353177
    Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
    Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
    BMC Plant Biol (2012) 12:28