Stem-loop nta-MIR156c

Accession

MI0021321

Description

Nicotiana tabacum nta-MIR156c precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

7 open access papers mention nta-MIR156c
(22 sentences)

Sequence

agaaucaagacUGACAGAAGAGAGUGAGCACacgcaggcaauuguauagagauuauauuacugucauuugcgugugcucacuucucuugcugucaucucucucuaua
(((....(((.(((((((((((((((((((((((((((((...(((((.....)))))...))))...))))))))))))).)))))).)))))))))...)))...

Structure

---   auca   c      -      -             ---    auu     g 
   aga    aga UGACAG AAGAGA GUGAGCACacgca   ggca   guaua a
   |||    ||| |||||| |||||| |||||||||||||   ||||   ||||| g
   ucu    ucu acuguc uucucu cacucgugugcgu   cugu   uauau a
aua   -cuc   -      g      u             uua    cau     u 

Annotation confidence Not enough data

Genome context

Unknown

Mature nta-miR156c

• Accession: MIMAT0024631
• Description: Nicotiana tabacum nta-miR156c mature miRNA
• Sequence: 12 - UGACAGAAGAGAGUGAGCAC - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28