miRBase entry: mml-mir-378j

Stem-loop mml-mir-378j


Accession
MI0021282
Description
Macaca mulatta mml-mir-378j precursor miRNA
Gene family
MIPF0001463; mir-378_2

Literature search
1 open access papers mention mml-mir-378j
(2 sentences)

Sequence

augcagugagugggggaggaACUGGAUUUGGAGCCAGAAgaacugguucuaauaucuacuucccuguguagaguugggauuugggauuauaugaguuaguacacaccaa
..........(((((((((...(((((((((((((((.....)))))))))).)))))))))))((((((.......((((((........))))))..))))))))).

Structure
augcagugag   -----------------------------------------      aAC     -          A 
          ugg                                         gggagg   UGGAU UUGGAGCCAG A
          |||                                         ||||||   ||||| |||||||||| g
          acc                                         cccuuc   aucua aaucuugguc a
---------a   acacaugauugaguauauuaggguuuaggguugagaugugu      ---     u          a 


Annotation confidence Not enough data
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Genome context
chr16: 43640938-43641046 [-]

Database links

Mature mml-miR-378j

Accession MIMAT0024621
Description Macaca mulatta mml-miR-378j mature miRNA
Sequence 21 - ACUGGAUUUGGAGCCAGAA - 39
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22454130
    Transcription factors are targeted by differentially expressed miRNAs in primates
    "Dannemann M, Prufer K, Lizano E, Nickel B, Burbano HA, Kelso J"
    "Genome Biol Evol (2012) 4:552-564