Stem-loop lus-MIR167i

Accession

MI0021210

Description

Linum usitatissimum lus-MIR167i precursor miRNA

Gene family

MIPF0000023; MIR167_1

Literature search

3 open access papers mention lus-MIR167i
(5 sentences)

Sequence

caugcaccaguggcaguUGAAGCUGCCAGCAUGAUCUGgauuuucccuugaauauuuuagcaccauucauucauguaugggagagacuagaucauauggcagcuucaccuguucauggugggcaug
(((((((((..(((((.(((((((((((..(((((((((.(((((((.(((((...............))))).....))))))).))))))))).))))))))))).)))))..))))..)))))

Structure

     --    gu     u           GC         a       ----u     auuuua 
caugc  acca  ggcag UGAAGCUGCCA  AUGAUCUGg uuuuccc     ugaau      g
|||||  ||||  ||||| |||||||||||  ||||||||| |||||||     |||||      c
guacg  uggu  uuguc acuucgacggu  uacuagauc gagaggg     acuua      a
     gg    ac     c           -a         a       uaugu     cuuacc 

Annotation confidence Not enough data

Genome context

Unknown

Mature lus-miR167i

• Accession: MIMAT0027190
• Description: Linum usitatissimum lus-miR167i mature miRNA
• Sequence: 18 - UGAAGCUGCCAGCAUGAUCUG - 38
• Evidence: not_experimental

References

1. PubMed ID: 23291876
   Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes
   "Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY"
   "Planta (2013) 237:1149-1161