Stem-loop lus-MIR167c

Accession

MI0021178

Description

Linum usitatissimum lus-MIR167c precursor miRNA

Gene family

MIPF0000023; MIR167_1

Literature search

3 open access papers mention lus-MIR167c
(5 sentences)

Sequence

aaguccacaaagggaaagagUGAAGCUGCCAGCAUGAUCUAccuuugggcuaguuaauuuuguagcgguuaacccaagcuaggucaugcugugacagccucauucuuuccccacuuuuguggaucuu
..(((((((((((((((((((((.(((((((((((((((((.(((.(((...((((......))))......)))))).)))))))))))).).)))).))))))))))))....)))))))))...

Structure

-aa         ----            A    - -            c   u   ---cua    au 
   guccacaaa    gggaaagagUGA GCUG C CAGCAUGAUCUA cuu ggg      guua  u
   |||||||||    |||||||||||| |||| | |||||||||||| ||| |||      ||||   
   uagguguuu    cccuuucuuacu cgac g gucguacuggau gaa ccc      cgau  u
uuc         ucac            c    a u            c   -   aauugg    gu 

Annotation confidence Not enough data

Genome context

Unknown

Mature lus-miR167c

• Accession: MIMAT0027158
• Description: Linum usitatissimum lus-miR167c mature miRNA
• Sequence: 21 - UGAAGCUGCCAGCAUGAUCUA - 41
• Evidence: not_experimental

References

1. PubMed ID: 23291876
   Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes
   "Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY"
   "Planta (2013) 237:1149-1161