miRBase entry: bta-mir-6121

Stem-loop bta-mir-6121


Accession
MI0021139
Description
Bos taurus bta-mir-6121 precursor miRNA


Sequence

26 reads, 5 reads per million, 13 experiments
ccUCGGAGCGCCCUCGCCAGACaccccugCCGGAUGAUGGACACUGAGGgcaggcuggcucca
....(((((((((((((((..((.((.....)).)).)))....)))))))......))))).

Structure
ccUC     ------       ----   GA  c  c 
    GGAGC      GCCCUCG    CCA  Ca cc u
    |||||      |||||||    |||  || || g
    ccucg      cgGGAGU    GGU  GU GG C
---a     gucgga       CACA   -A  A  C 


Annotation confidence Not enough data
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Genome context
chr16: 77366284-77366346 [+]

Database links

Mature bta-miR-6121-5p

Accession MIMAT0024592
Description Bos taurus bta-miR-6121-5p mature miRNA
Sequence 3 - UCGGAGCGCCCUCGCCAGAC - 22
Evidence experimental
Illumina [1]

Mature bta-miR-6121-3p

Accession MIMAT0024593
Description Bos taurus bta-miR-6121-3p mature miRNA
Sequence 30 - CCGGAUGAUGGACACUGAGG - 49
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22298343
    Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells
    Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA
    J Cell Biochem (2012) 113:2098-2111