miRBase entry: bta-mir-6119

Stem-loop bta-mir-6119


Accession
MI0021137
Description
Bos taurus bta-mir-6119 precursor miRNA

Literature search
2 open access papers mention bta-mir-6119
(2 sentences)

Sequence

52662 reads, 667 reads per million, 75 experiments
auuuugAGAGGUAAAAAAUUGAUUUGACUaguucuuuaacacaucuaGCAAAUCAUUUUUUACUCUCCAAaaagaac
.(((((.((((((((((((.((((((.((((.............))))))))))))))))))).)))))))).....

Structure
----a     A   -         U      A    uucuu 
     uuuug GAG GUAAAAAAU GAUUUG CUag     u
     ||||| ||| ||||||||| |||||| ||||     a
     aaAAC CUC CAUUUUUUA CUAAAC Gauc     a
caaga     -   U         -      -    uacac 


Annotation confidence High
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Genome context
chrX: 4014633-4014709 [-]

Database links

Mature bta-miR-6119-5p

Accession MIMAT0024588
Description Bos taurus bta-miR-6119-5p mature miRNA
Sequence 7 - AGAGGUAAAAAAUUGAUUUGACU - 29
Evidence experimental
Illumina [1-2]

Mature bta-miR-6119-3p

Accession MIMAT0024589
Description Bos taurus bta-miR-6119-3p mature miRNA
Sequence 48 - GCAAAUCAUUUUUUACUCUCCAA - 70
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026

  2. PubMed ID: 22298343
    Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells
    Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA
    J Cell Biochem (2012) 113:2098-2111