miRBase entry: bta-mir-2285j-2

Stem-loop bta-mir-2285j-2


Accession
MI0021134
Description
Bos taurus bta-mir-2285j-2 precursor miRNA
Gene family
MIPF0000747; mir-2284

Literature search
11 open access papers mention bta-mir-2285j-2
(15 sentences)

Sequence

104 reads, 13 reads per million, 18 experiments
gcauugggcuggccaaaaagcuucuucgggcuuccuauaagaugguacagAAAAACCAGAACGAACUUUUUGgccaacccaguac
..((((((.(((((((((((.((((((((....)).......((((........))))))).)))))))))))))).))))))..

Structure
gc      c           c   -   gggcuuccuauaaga    aca 
  auuggg uggccaaaaag uuc uuc               uggu   g
  |||||| ||||||||||| ||| |||               ||||    
  ugaccc accgGUUUUUC AAG AAG               ACCA   A
ca      a           -   C   ---------------    AAA 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr23: 3219072-3219156 [-]

Database links

Mature bta-miR-2285j

Accession MIMAT0024585
Description Bos taurus bta-miR-2285j mature miRNA
Sequence 51 - AAAAACCAGAACGAACUUUUUG - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22298343
    Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells
    Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA
    J Cell Biochem (2012) 113:2098-2111