miRBase entry: bta-mir-2285j-1

Stem-loop bta-mir-2285j-1


Accession
MI0021133
Description
Bos taurus bta-mir-2285j-1 precursor miRNA
Gene family
MIPF0000747; mir-2284

Literature search
11 open access papers mention bta-mir-2285j-1
(15 sentences)

Sequence

104 reads, 13 reads per million, 17 experiments
auuggucaaaaauuuguuuggguuuuuccaguugauguugAAAAACCAGAACGAACUUUUUGgccaacc
.((((((((((((((((((.((((((((((.....))..)))))))).))))))).)))))))))))..

Structure
-a           -       g        --  g 
  uuggucaaaaa uuuguuu gguuuuuc  ca u
  ||||||||||| ||||||| ||||||||  || u
  aaccgGUUUUU AAGCAAG CCAAAAAg  gu g
cc           C       A        uu  a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr17: 1356425-1356493 [+]

Database links

Mature bta-miR-2285j

Accession MIMAT0024585
Description Bos taurus bta-miR-2285j mature miRNA
Sequence 41 - AAAAACCAGAACGAACUUUUUG - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22298343
    Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells
    Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA
    J Cell Biochem (2012) 113:2098-2111