miRBase entry: bta-mir-2285g-1

Stem-loop bta-mir-2285g-1


Accession
MI0021130
Description
Bos taurus bta-mir-2285g-1 precursor miRNA
Gene family
MIPF0000747; mir-2284

Literature search
11 open access papers mention bta-mir-2285g-1
(15 sentences)

Sequence

2936 reads, 101 reads per million, 71 experiments
gccaaaaaguucauucggauuuuccuguaagauauggaaAAACCUGAACAAGCUUUUUGGc
(((((((((((..(((((.((((((..........)))))).)).)))..)))))))))))

Structure
           ca   -  a      ugua 
gccaaaaaguu  uuc gg uuuucc    a
|||||||||||  ||| || ||||||     
cGGUUUUUCGA  AAG CC AAaagg    g
           AC   U  A      uaua 


Annotation confidence High
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Genome context
chr18: 25160438-25160498 [+]

Database links

Mature bta-miR-2285g

Accession MIMAT0024582
Description Bos taurus bta-miR-2285g mature miRNA
Sequence 40 - AAACCUGAACAAGCUUUUUGG - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22298343
    Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells
    Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA
    J Cell Biochem (2012) 113:2098-2111

  2. PubMed ID: 23100578
    Profiling of differentially expressed microRNA and the bioinformatic target gene analyses in bovine fast- and slow-type muscles by massively parallel sequencing
    "Muroya S, Taniguchi M, Shibata M, Oe M, Ojima K, Nakajima I, Chikuni K"
    "J Anim Sci (2013) 91:90-103