miRBase entry: bta-mir-2285e-1

Stem-loop bta-mir-2285e-1


Accession
MI0021126
Description
Bos taurus bta-mir-2285e-1 precursor miRNA
Gene family
MIPF0000747; mir-2284

Literature search
12 open access papers mention bta-mir-2285e-1
(16 sentences)

Sequence

3182 reads, 265 reads per million, 32 experiments
gccaaaaaguucguucggauuucucuguaagcugguguggauAAACCUGAACGAACUUUUUGGC
((((((((((((((((((.(((.(((....((....))))).))).))))))))))))))))))

Structure
                  a   c   guaa  u 
gccaaaaaguucguucgg uuu ucu    gc g
|||||||||||||||||| ||| |||    ||  
CGGUUUUUCAAGCAAGUC AAA agg    ug g
                  C   u   ----  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr1: 158734396-158734459 [+]

Database links

Mature bta-miR-2285e

Accession MIMAT0024580
Description Bos taurus bta-miR-2285e mature miRNA
Sequence 43 - AAACCUGAACGAACUUUUUGGC - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22298343
    Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells
    Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA
    J Cell Biochem (2012) 113:2098-2111