miRBase entry: bta-mir-652

Stem-loop bta-mir-652


Accession
MI0021123
Description
Bos taurus bta-mir-652 precursor miRNA
Gene family
MIPF0000333; mir-652

Literature search
4 open access papers mention bta-mir-652
(13 sentences)

Sequence

3315 reads, 79 reads per million, 71 experiments
acgaauggcuaugcacugcacaacccuaggagagggugccauucacauagacuagaauugAAUGGCGCCACUAGGGUUGUGcagugcacaaccuacac
......((...((((((((((((((((((.....(((((((((((.............))))))))))).))))))))))))))))))...)).....

Structure
acgaau  cua                  gagag           cauag 
      gg   ugcacugcacaacccuag     ggugccauuca     a
      ||   ||||||||||||||||||     |||||||||||     c
      cc   acgugacGUGUUGGGAUC     CCGCGGUAAgu     u
-cacau  aac                  ----A           uaaga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrX: 63688261-63688358 [+]

Database links

Mature bta-miR-652

Accession MIMAT0024578
Description Bos taurus bta-miR-652 mature miRNA
Sequence 61 - AAUGGCGCCACUAGGGUUGUG - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22298343
    Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells
    Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA
    J Cell Biochem (2012) 113:2098-2111