Stem-loop bta-mir-450b

Accession

MI0021121

Description

Bos taurus bta-mir-450b precursor miRNA

Gene family

MIPF0000128; mir-450

Literature search

5 open access papers mention bta-mir-450b
(8 sentences)

Sequence

11246 reads, 132 reads per million, 67 experiments

aaaauuauUUUUGCAAUAUGUUCCUGAAUAuuuaauauaaguauauugggaacauuuugcauccauaguuuuguaucaguauuuag
((((((((...(((((.(((((((((((((((((...))))))).)))))))))).)))))...))))))))..............

Structure

--------------        UUU     U          -       a 
              aaaauuau   UGCAA AUGUUCCUGA AUAuuua  
              ||||||||   ||||| |||||||||| ||||||| u
              uuuugaua   acguu uacaaggguu uaugaau  
gauuuaugacuaug        ccu     u          a       a 

Annotation confidence Not enough data

Genome context

chrX: 18281872-18281957 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from bta-mir-450b

Mature bta-miR-450b

• Accession: MIMAT0024576
• Description: Bos taurus bta-miR-450b mature miRNA
• Sequence: 9 - UUUUGCAAUAUGUUCCUGAAUA - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22298343
   Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells
   Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA
   J Cell Biochem (2012) 113:2098-2111