miRBase entry: bta-mir-1260b

Stem-loop bta-mir-1260b


Accession
MI0021113
Description
Bos taurus bta-mir-1260b precursor miRNA
Gene family
MIPF0001381; mir-1260b

Literature search
3 open access papers mention bta-mir-1260b
(3 sentences)

Sequence

91 reads, 6 reads per million, 41 experiments
guugcugcugcucgccaucgAUCCCACCACUGCCACCAcugcugcuacugcuccgcaggugcugcugguggugaugaugauaguccggcgggggcgcugg
(((.((((((..(..((((.((((((((((.((.(((..(((.((....))...)))))))).).)))))).)))))))...)..)))))).))).....

Structure
-----   g      cu -gc    g   -      - U  C   Ac   --u  u 
     guu cugcug  c   cauc AUC CCACCA C GC ACC  ugc   gc a
     ||| ||||||  |   |||| ||| |||||| | || |||  |||   ||  
     cgg ggcggc  g   guag uag gguggu g cg ugg  acg   cg c
ggucg   g      cu aua    -   u      c u  -   --   ccu  u 


Annotation confidence Not enough data
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Genome context
chr15: 14284962-14285061 [-]

Database links

Mature bta-miR-1260b

Accession MIMAT0024568
Description Bos taurus bta-miR-1260b mature miRNA
Sequence 21 - AUCCCACCACUGCCACCA - 38
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22298343
    Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells
    Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA
    J Cell Biochem (2012) 113:2098-2111