Stem-loop cca-MIR169b

Accession

MI0021073

Description

Cynara cardunculus cca-MIR169b precursor miRNA

Gene family

MIPF0000012; MIR169_1

Literature search

1 open access papers mention cca-MIR169b
(1 sentences)

Sequence

uucuggUAGCCAAGGAUGACUUGCUACaucccaauucaaggugguagcaaacaacgccuuguuugguuuuucaggcagucacuccuuggcuaacuugaa
.((.(((((((((((((((((.(((.....((((..(((((((...........))))))).)))).......)))))))).))))))))).))).)).

Structure

u  u   -         -     U   --ACauc    uu       guag 
 uc ggU AGCCAAGGA UGACU GCU       ccaa  caaggug    c
 || ||| ||||||||| ||||| |||       ||||  |||||||    a
 ag uca ucgguuccu acuga cgg       gguu  guuccgc    a
a  u   a         c     -   acuuuuu    -u       aaca 

Annotation confidence Not enough data

Genome context

Unknown

Mature cca-miR169b

• Accession: MIMAT0024519
• Description: Cynara cardunculus cca-miR169b mature miRNA
• Sequence: 7 - UAGCCAAGGAUGACUUGCUAC - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22272770
   The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis
   De Paola D, Cattonaro F, Pignone D, Sonnante G
   BMC Genomics (2012) 13:41