Stem-loop mse-mir-210

Accession

MI0020969

Description

Manduca sexta mse-mir-210 precursor miRNA

Gene family

MIPF0000086; mir-210

Sequence

gagaaugaagcccaaagcagcugcuggccacugcacaagauuaguuaaaucuauacuCUUGUGCGUGUGACAGCGGCUAUugcgggcauuucauugucu
((.((((((((((..((.((((((((..((((((((((((.(((......)))...))))))))).))).)))))))).))..))))..)))))).)).

Structure

-  g      --    aa  c        gc   -         --u   uu 
 ga aaugaa  gccc  ag agcugcug  cac ugcacaaga   uag  a
 || ||||||  ||||  || ||||||||  ||| |||||||||   |||   
 cu uuacuu  cggg  uU UCGGCGAC  GUG GCGUGUUCu   auc  a
u  g      ua    cg  A        -A   U         cau   ua 

Annotation confidence Not enough data

Genome context

JH668480.1: 129534-129632 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mse-mir-210

Mature mse-miR-210

• Accession: MIMAT0024420
• Description: Manduca sexta mse-miR-210 mature miRNA
• Sequence: 58 - CUUGUGCGUGUGACAGCGGCUAU - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22406339
   Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
   "Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
   "Insect Biochem Mol Biol (2012) 42:381-395