Stem-loop ppy-mir-2861

Accession

MI0020953

Description

Pongo pygmaeus ppy-mir-2861 precursor miRNA

Sequence

cggcggcggaggcgccucugcagcuccggcucccccuggccucucgggaacuacaagucccagggggccuGGCGGCGGGCGUCGGGCGgaagaggcggggucggcgcc
.((((.(((...(((((((...((.(((((.(((((.(((((((.((((........)))).))))))).))....))).)))))))...)))))))...))).))))

Structure

c    g   agg       gca  u     u   ----  u       c    acu 
 ggcg cgg   cgccucu   gc ccggc ccc    cc ggccucu ggga   a
 |||| |||   |||||||   || ||||| |||    || ||||||| ||||    
 ccgc gcu   gcggaga   CG GGCUG GGG    GG ccggggg cccu   c
-    g   ggg       agG  -     C   CGGC  u       a    gaa 

Annotation confidence Not enough data

Genome context

chr9: 124702853-124702960 [+]

Mature ppy-miR-2861

• Accession: MIMAT0024405
• Description: Pongo pygmaeus ppy-miR-2861 mature miRNA
• Sequence: 71 - GGCGGCGGGCGUCGGGCG - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116