Stem-loop ppy-mir-1976

Accession

MI0020952

Description

Pongo pygmaeus ppy-mir-1976 precursor miRNA

Gene family

MIPF0001633; mir-1976

Sequence

uggccucugggcacggggguuggaugugcaaaggguggcagcaaggaaggcagggguccugaggugugucCUCCUGCCCUCCUUGCUGUAGacuuuggccugagcaaggag
.((((((((....)))))))).......(((((....((((((((((.((((((((.((......).).)).)))))).))))))))))...))))).(((.....)))..

Structure

uggccucugggcacggggguuggaugug     ggug          a      -  u - ug 
                            caaag    gcagcaagga ggcagg gg c c  a
                            |||||    |||||||||| |||||| || | |   
                            guuuc    UGUCGUUCCU CCGUCC Cc g g  g
--------------gaggaacgaguccg     -aGA          C      U  u u ug 

Annotation confidence Not enough data

Genome context

chr1: 203816708-203816818 [-]

Mature ppy-miR-1976

• Accession: MIMAT0024404
• Description: Pongo pygmaeus ppy-miR-1976 mature miRNA
• Sequence: 71 - CUCCUGCCCUCCUUGCUGUAG - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116