miRBase entry: ppy-mir-4796

Stem-loop ppy-mir-4796


Accession
MI0020947
Description
Pongo pygmaeus ppy-mir-4796 precursor miRNA
Gene family
MIPF0001402; mir-4796


Sequence

aggcucaagucauggcaguaaauuugugucuauacucugucacuuuacuuuuggccucaagucauugcagUAAAGUGGCAGAGUAUAGACACAaauuuaggccuucuuccu
(((...(((....(((..(((((((((((((((((((((((((((((((..((((.....))))....))))))))))))))))))))))))))))))).)))..))))))

Structure
   cuc   ucau   ag                               --uu    c 
agg   aag    ggc  uaaauuugugucuauacucugucacuuuacu    uggc u
|||   |||    |||  |||||||||||||||||||||||||||||||    |||| c
ucc   uuc    ccg  auuuaaACACAGAUAUGAGACGGUGAAAUga    acug a
   ---   --uu   -g                               cguu    a 


Annotation confidence Not enough data
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Genome context
chr3: 18054080-18054190 [+]

Database links

Mature ppy-miR-4796

Accession MIMAT0024399
Description Pongo pygmaeus ppy-miR-4796 mature miRNA
Sequence 71 - UAAAGUGGCAGAGUAUAGACACA - 93
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116