Stem-loop ppy-mir-4520a

Accession

MI0020937

Description

Pongo pygmaeus ppy-mir-4520a precursor miRNA

Gene family

MIPF0001272; mir-4520

Sequence

guagccggaaaauuuauuaagcgcuuacugugugccaccugcauguuuucuguccaaaucagaaaaggauuUGGACAGAAAACACGCAGGAAGaaggaauuaacccuug
....................((((.......))))..(((((.(((((((((((((((((.......))))))))))))))))).)))))...((((.......)))).

Structure

guagccggaaaauuuauuaagcgcuuacugugugcca     a                 ag 
                                     ccugc uguuuucuguccaaauc  a
                                     ||||| |||||||||||||||||  a
                                     GGACG ACAAAAGACAGGUuuag  a
------------------guucccaauuaaggaaGAA     C                 ga 

Annotation confidence Not enough data

Genome context

chr17: 6659057-6659165 [-]

Mature ppy-miR-4520a

• Accession: MIMAT0024389
• Description: Pongo pygmaeus ppy-miR-4520a mature miRNA
• Sequence: 72 - UGGACAGAAAACACGCAGGAAG - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116