miRBase entry: ppy-mir-4791

Stem-loop ppy-mir-4791


Accession
MI0020928
Description
Pongo pygmaeus ppy-mir-4791 precursor miRNA
Gene family
MIPF0001529; mir-4791


Sequence

agcuaauacaauuuaagaacUGGAUAUGAUGACUGAAAuaagcuccauaucaacgagaauuucgaugggauuaugugcagucaauguccaguaauuagaaaagcuauc
((((.......(((((..(((((((((..((((((..((((..(((((.....(((.....)))))))).))))...)))))))))))))))..)))))..))))...

Structure
---    aauacaa     ga         GA      -AA    gc     aucaa   g 
   agcu       uuuaa  acUGGAUAU  UGACUG   Auaa  uccau     cga a
   ||||       |||||  |||||||||  ||||||   ||||  |||||     ||| a
   ucga       agauu  ugaccugua  acugac   uauu  gggua     gcu u
cua    -----aa     aa         --      gug    -a     -----   u 


Annotation confidence Not enough data
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Genome context
chr3: 128181422-128181529 [+]

Database links

Mature ppy-miR-4791

Accession MIMAT0024380
Description Pongo pygmaeus ppy-miR-4791 mature miRNA
Sequence 21 - UGGAUAUGAUGACUGAAA - 38
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116