Stem-loop ppy-mir-4782

Accession

MI0020924

Description

Pongo pygmaeus ppy-mir-4782 precursor miRNA

Gene family

MIPF0001546; mir-4782

Sequence

aacuuuaacugauugcccagUUCUGGAUAUGAAGACAAUCAagaaaagauuugguguucuugauugucuucauaucuagaacugggcagucaguuaaaggagcaggcu
..(((((((((((((((((((((((((((((((((((((((((((...........))))))))))))))))))))))))))))))))))))))))))).........

Structure

-------aa                                           aaga 
         cuuuaacugauugcccagUUCUGGAUAUGAAGACAAUCAagaa    u
         |||||||||||||||||||||||||||||||||||||||||||    u
         gaaauugacugacgggucaagaucuauacuucuguuaguucuu    u
ucggacgag                                           gugg 

Annotation confidence Not enough data

Genome context

chr2B: 21052455-21052562 [+]

Mature ppy-miR-4782

• Accession: MIMAT0024376
• Description: Pongo pygmaeus ppy-miR-4782 mature miRNA
• Sequence: 21 - UUCUGGAUAUGAAGACAAUCA - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116