Stem-loop ppy-mir-676

Accession

MI0020913

Description

Pongo pygmaeus ppy-mir-676 precursor miRNA

Gene family

MIPF0000471; mir-676

Sequence

agacuucauaucagauucucaccugaacgcaugacucuucaaccucaggacuugcagaauugauggaaugCCGUCCUAAGGUUGUUGAGUUGugcguuucugggcauuuc
............((((.((((...(((((((((((((..((((((.(((((..(((............))).))))).))))))..))))))))))))).)))).)))).

Structure

agacuucauauc    u    ccu             uu      c     uu   gaauu 
            agau cuca   gaacgcaugacuc  caaccu aggac  gca     g
            |||| ||||   |||||||||||||  |||||| |||||  |||      
            uuua gggu   uuugcguGUUGAG  GUUGGA UCCUG  Cgu     a
-----------c    c    --c             UU      A     -C   aaggu 

Annotation confidence Not enough data

Genome context

chrX: 67680369-67680478 [+]

Mature ppy-miR-676

• Accession: MIMAT0024365
• Description: Pongo pygmaeus ppy-miR-676 mature miRNA
• Sequence: 71 - CCGUCCUAAGGUUGUUGAGUUG - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116