Stem-loop ppy-mir-152

Accession

MI0020904

Description

Pongo pygmaeus ppy-mir-152 precursor miRNA

Gene family

MIPF0000056; mir-148

Sequence

ggaggcucggcccgcugucccccccggcccagguucugugauacacuccgacucgggcucuggagcagUCAGUGCAUGACAGAACUUGGgcccggaaggaccuucugca
(..(((...)))..).((((..((.((((((((((((((.((.((((..((((...(((....))))))))))).)).)))))))))))))).))..))))........

Structure

ggaggcucggcccgcu    cc  c              g  a    cc    cgg   c 
                gucc  cc ggcccagguucugu au cacu  gacu   gcu u
                ||||  || |||||||||||||| || ||||  ||||   |||  
                cagg  gg ccgGGUUCAAGACA UA GUGA  CUga   cga g
--------acgucuuc    aa  c              G  C    --    ---   g 

Annotation confidence Not enough data

Genome context

NW_002963091.1: 970641-970749 [-]

Mature ppy-miR-152

• Accession: MIMAT0024356
• Description: Pongo pygmaeus ppy-miR-152 mature miRNA
• Sequence: 69 - UCAGUGCAUGACAGAACUUGG - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116