miRBase entry: mml-mir-1283

Stem-loop mml-mir-1283


Accession
MI0020900
Description
Macaca mulatta mml-mir-1283 precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

64 reads, 10 reads per million, 3 experiments
gaacaucccaggcugugacuCUACAAAGGAAAGCACUUUCuguugucgaaagaaaagaaagcgcuucccuuuugagaauuacgguuugagaaaagcaguguugaaguuga
.....((.((((((((((.(((..(((((.((((.((((((....((....))..)))))).)))).)))))..))).)))))))))).))...................

Structure
--------------gaaca  c          c   AC     A    A      guug  g 
                   uc caggcuguga uCU  AAAGG AAGC CUUUCu    uc a
                   || |||||||||| |||  ||||| |||| ||||||    ||  
                   ag guuuggcauu aga  uuucc uucg gaaaga    ag a
aguugaaguugugacgaaa  a          a   gu     c    c      --aa  a 


Annotation confidence Not enough data
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Genome context
chr19: 49032979-49033088 [+]
Clustered miRNAs
7 other miRNAs are < 10 kb from mml-mir-1283
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-1283

Accession MIMAT0024352
Description Macaca mulatta mml-miR-1283 mature miRNA
Sequence 21 - CUACAAAGGAAAGCACUUUC - 40
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116