miRBase entry: mml-mir-517c

Stem-loop mml-mir-517c


Accession
MI0020899
Description
Macaca mulatta mml-mir-517c precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

102 reads, 21 reads per million, 4 experiments
uauuggagcgagaagaucuccucaugcagugacacucuaaauggcagcacugucuguggucuaaaacaagAUCGUGCAGCCUUUUAGAGUGuuacugugugagaaaagcaa
.........((((...))))(((((((((((((((((((((.(((.((((.((((((........)).)))).)))).))).)))))))))))))))))))))........

Structure
uauuggagcgagaagaucuc                     u   a    u    -  ggu 
                    cucaugcagugacacucuaaa ggc gcac gucu gu   c
                    ||||||||||||||||||||| ||| |||| |||| ||    
                    gagugugucauuGUGAGAUUU CCG CGUG UAga ca   u
------------aacgaaaa                     U   A    C    a  aaa 


Annotation confidence Not enough data
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Genome context
chr19: 49094936-49095046 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from mml-mir-517c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-517c

Accession MIMAT0024351
Description Macaca mulatta mml-miR-517c mature miRNA
Sequence 71 - AUCGUGCAGCCUUUUAGAGUG - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116