miRBase entry: mml-mir-1243

Stem-loop mml-mir-1243


Accession
MI0020886
Description
Macaca mulatta mml-mir-1243 precursor miRNA
Gene family
MIPF0001821; mir-1243


Sequence

261 reads, 3 reads per million, 7 experiments
cugacagauugguugacuguguacucuuauauuuuauUCCUGUAACUGGGCCAGUUUCugcccuuaacuaAAACUGGAUCAAUUAUAGGAGugaaauaaaaguccaucucc
...((((.........)))).....(((.((((((((((((((((.((..(((((((..(.......)..)))))))..)).)))))))))))))))).))).........

Structure
cugacagauugguugacuguguacu   a                C  GG       Cu cc 
                         cuu uauuuuauUCCUGUAA UG  CCAGUUU  g  c
                         ||| |||||||||||||||| ||  |||||||  |  u
                         gaa auaaaguGAGGAUAUU AC  GGUCAAA  c  u
----------------ccucuaccu   a                A  UA       au aa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr5: 112060510-112060620 [+]

Database links

Mature mml-miR-1243-3p

Accession MIMAT0024338
Description Macaca mulatta mml-miR-1243-3p mature miRNA
Sequence 71 - AAACUGGAUCAAUUAUAGGAG - 91
Evidence experimental
Illumina [1-2]

Mature mml-miR-1243-5p

Accession MIMAT0027116
Description Macaca mulatta mml-miR-1243-5p mature miRNA
Sequence 38 - UCCUGUAACUGGGCCAGUUUC - 58
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45