miRBase entry: mml-mir-1250

Stem-loop mml-mir-1250


Accession
MI0020882
Description
Macaca mulatta mml-mir-1250 precursor miRNA
Gene family
MIPF0000696; mir-1250


Sequence

ucucgcuggccuggaaggugACGGUGCUGAAUGUGGCCUUuuugccuuuuccaaaggccacauuuuccagcccauucacccuuccagagcccucugagguggccuaggcc
(((((..((((((((((((((.((.((((((((((((((((...........))))))))))))...))))))..))).)))))))).)))...))))).(((....)))

Structure
-----------     -cu   -        -   -C  U    ---            uugc 
           ucucg   ggc cuggaagg ugA  GG GCUG   AAUGUGGCCUUu    c
           |||||   ||| |||||||| |||  || ||||   ||||||||||||    u
           ggagu   ccg gaccuucc acu  cc cgac   uuacaccggaaa    u
ccggauccggu     cuc   a        c   ua  -    cuu            ccuu 


Annotation confidence Not enough data
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Genome context
chr16: 74994245-74994354 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from mml-mir-1250
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-1250

Accession MIMAT0024334
Description Macaca mulatta mml-miR-1250 mature miRNA
Sequence 21 - ACGGUGCUGAAUGUGGCCUU - 40
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116