Stem-loop ggo-mir-502b

Accession

MI0020856

Description

Gorilla gorilla ggo-mir-502b precursor miRNA

Gene family

MIPF0000139; mir-500

Sequence

cucacagggcuuuguguucugcucccccucucuaauccuugcuaccugggugagagugcugucugaaugcaAUGCACCUGGGCAAGGAUUCUGAgagcgagagcuucaucu
.....(((((.....)))))((((.(.(((((.(((((((((...(((((((....(((.........)))...))))))))))))))))..))))).).)))).......

Structure

cucacagggcuuuguguucu    c c     -u         uac       agag   ugu 
                    gcuc c cucuc  aauccuugc   cugggug    ugc   c
                    |||| | |||||  |||||||||   |||||||    |||   u
                    cgag g gagAG  UUAGGAACG   GGUCCAC    acg   g
-------------ucuacuu    a c     UC         ---       -GUA   uaa 

Annotation confidence Not enough data

Genome context

chrX: 50442355-50442465 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from ggo-mir-502b

Mature ggo-miR-502b

• Accession: MIMAT0024308
• Description: Gorilla gorilla ggo-miR-502b mature miRNA
• Sequence: 72 - AUGCACCUGGGCAAGGAUUCUGA - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116