miRBase entry: ggo-mir-1289

Stem-loop ggo-mir-1289


Accession
MI0020830
Description
Gorilla gorilla ggo-mir-1289 precursor miRNA
Gene family
MIPF0000626; mir-1289


Sequence

aggaauuaaaaacaaaacugguaaaugcagacucuuggauuccacccccagagaaucccuaaaccgggggUGGAAUCCAGGAAUCUGCAUUUuagaaaguacccagggugau
.................((((.(((((((((.(((((((((((((((((................))))))))))))))))).)))))))))..........))))......

Structure
aggaauuaaaaacaaaa    ---------u         c                 agagaau 
                 cugg          aaaugcaga ucuuggauuccaccccc       c
                 ||||          ||||||||| |||||||||||||||||        
                 gacc          UUUACGUCU AGGACCUAAGGUggggg       c
-----------uagugg    caugaaagau         A                 ccaaauc 


Annotation confidence Not enough data
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Genome context
chr20: 34118614-34118725 [-]

Database links

Mature ggo-miR-1289

Accession MIMAT0024282
Description Gorilla gorilla ggo-miR-1289 mature miRNA
Sequence 71 - UGGAAUCCAGGAAUCUGCAUUU - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116