Stem-loop ggo-mir-1343

Accession

MI0020805

Description

Gorilla gorilla ggo-mir-1343 precursor miRNA

Gene family

MIPF0001206; mir-1343

Literature search

1 open access papers mention ggo-mir-1343
(2 sentences)

Sequence

aaggagcaagacgaugauccuggcgucggugcugaggagcgguccccggggcgggcuuccgcuccggcccCUCCUGGGGCCCGCACUCgcgcuccgggcccgcucgac
.((((.((......)).))))(((.((((.((((((..((((.((((((((.(((((........))))).)))))))).)))).)))).)).)))))))........

Structure

aaggagcaagacgaugauccu   g    u  -    ga    u        c     ucc 
                     ggc ucgg gc ugag  gcgg ccccgggg gggcu   g
                     ||| |||| || ||||  |||| |||||||| |||||    
                     ccg ggcc cg gCUC  CGCC GGGGUCCU cccgg   c
-------------cagcucgc   -    u  c    -A    C        C     ccu 

Annotation confidence Not enough data

Genome context

chr16: 31232623-31232730 [+]

Mature ggo-miR-1343

• Accession: MIMAT0024257
• Description: Gorilla gorilla ggo-miR-1343 mature miRNA
• Sequence: 71 - CUCCUGGGGCCCGCACUC - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116