Stem-loop ggo-mir-517c

Accession

MI0020802

Description

Gorilla gorilla ggo-mir-517c precursor miRNA

Gene family

MIPF0000020; mir-515

Sequence

ugucaaaaaaaagaagaccucaggcugugacccucuagauggaagcacugucuguuguguaaaagaaaagAUCGUGCAUCCCUUUAGAGUGuuacuguuugagaaaagcaa
.(((...........)))(((((((.(((((.(((((((.(((.((((.((((.((.(.....).)).)))).)))).))).))))))).))))).)))))))........

Structure

ugucaaaaaaaagaagac       u     c       u   a    u    g  g g 
                  cucaggc gugac cucuaga gga gcac gucu uu u u
                  ||||||| ||||| ||||||| ||| |||| |||| || | a
                  gaguuug cauuG GAGAUUU CCU CGUG UAga aa a a
----------aacgaaaa       u     U       C   A    C    a  g a 

Annotation confidence Not enough data

Genome context

chr19: 53054731-53054841 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from ggo-mir-517c

Mature ggo-miR-517c

• Accession: MIMAT0024254
• Description: Gorilla gorilla ggo-miR-517c mature miRNA
• Sequence: 71 - AUCGUGCAUCCCUUUAGAGUG - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116