Stem-loop ggo-mir-493

Accession

MI0020797

Description

Gorilla gorilla ggo-mir-493 precursor miRNA

Gene family

MIPF0000230; mir-493

Sequence

ucauucuggccuccagggcuUUGUACAUGGUAGGCUUUCAUucauucguuugcacauucggugaaggucuacugugugccaggcccugugccaggcaucguguagaugga
....((((((...((((((((.((((((((((((((((((((.................)))))))))))))))))))).)))))))).))))))((((.....))))..

Structure

-----------ucau      cuc        U                    cauucgu 
               ucuggc   cagggcuU GUACAUGGUAGGCUUUCAUu       u
               ||||||   |||||||| ||||||||||||||||||||       u
               ggaccg   gucccgga cgugugucaucuggaagugg       g
agguagaugugcuac      --u        c                    cuuacac 

Annotation confidence Not enough data

Genome context

chr14: 84887397-84887506 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-mir-493

Mature ggo-miR-493

• Accession: MIMAT0024249
• Description: Gorilla gorilla ggo-miR-493 mature miRNA
• Sequence: 21 - UUGUACAUGGUAGGCUUUCAU - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116