Stem-loop ggo-mir-4520b

Accession

MI0020793

Description

Gorilla gorilla ggo-mir-4520b precursor miRNA

Gene family

MIPF0001272; mir-4520

Sequence

cgucgccugccugcuguaccagggguugauuccuucuuccugcguguuuucuguccaaauccuuuucugaUUUGGACAGAAAACACGCAGGuggcacacaguaagcgcuua
....((..((.((((((.(((((((.....))))....(((((((((((((((((((((((.......))))))))))))))))))))))))))...)))))).))))...

Structure

cguc  cu  c      --a   gggguugauuccuucuu                       cu 
    gc  gc ugcugu   cca                 ccugcguguuuucuguccaaauc  u
    ||  || ||||||   |||                 |||||||||||||||||||||||  u
    cg  cg augaca   ggu                 GGACGCACAAAAGACAGGUUUag  u
-auu  --  a      cac   -----------------                       uc 

Annotation confidence Not enough data

Genome context

chr17: 6638752-6638862 [+]

Mature ggo-miR-4520b

• Accession: MIMAT0024246
• Description: Gorilla gorilla ggo-miR-4520b mature miRNA
• Sequence: 71 - UUUGGACAGAAAACACGCAGG - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116