Stem-loop ggo-mir-1250

Accession

MI0020782

Description

Gorilla gorilla ggo-mir-1250 precursor miRNA

Gene family

MIPF0000696; mir-1250

Sequence

ucccgcuggccuggcaggugACGGUGCUGGAUGUGGCCUUuuugccuuuucuaaaggccacguuuuccagcccauucaaccuuccagagcccucugagguggccgcaggc
..((((((((((((.((((((.((.((((((((((((((((...........))))))))))...))))))))..)).)))).)))).)))......)))))........

Structure

------uc     ------   -    c    -  -C  U      ---          uugc 
        ccgcu      ggc cugg aggu gA  GG GCUGGA   UGUGGCCUUu    c
        |||||      ||| |||| |||| ||  || ||||||   ||||||||||    u
        ggugg      ccg gacc ucca cu  cc cgaccu   gcaccggaaa    u
cggacgcc     agucuc   a    u    a  ua  -      uuu          ucuu 

Annotation confidence Not enough data

Genome context

chr5: 1916389-1916498 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-mir-1250

Mature ggo-miR-1250

• Accession: MIMAT0024235
• Description: Gorilla gorilla ggo-miR-1250 mature miRNA
• Sequence: 21 - ACGGUGCUGGAUGUGGCCUU - 40
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116