miRBase entry: ggo-mir-505

Stem-loop ggo-mir-505


Accession
MI0020775
Description
Gorilla gorilla ggo-mir-505 precursor miRNA
Gene family
MIPF0000217; mir-505


Sequence

uaaauugaugcacccagugggggagccaggaaguauugauguuucugccaguuuagcGUCAACACUUGCUGGUUUCCucucuggagcaucgccaaguucguggauuuucauu
.....((((((..((((.(((((((((((.((((.((((((((...........)))))))).)))).))))))))))).)))).))))))(((......))).........

Structure
----------------uaaau      ac    u           g    a        ucug 
                     ugaugc  ccag gggggagccag aagu uugauguu    c
                     ||||||  |||| ||||||||||| |||| ||||||||    c
                     gcuacg  gguc cuCCUUUGGUC UUCA AACUGcga    a
uuacuuuuaggugcuugaacc      -a    u           G    C        uuug 


Annotation confidence Not enough data
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Genome context
chrX: 140004695-140004806 [-]

Database links

Mature ggo-miR-505

Accession MIMAT0024228
Description Gorilla gorilla ggo-miR-505 mature miRNA
Sequence 58 - GUCAACACUUGCUGGUUUCC - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116