miRBase entry: ggo-mir-3943

Stem-loop ggo-mir-3943


Accession
MI0020757
Description
Gorilla gorilla ggo-mir-3943 precursor miRNA
Gene family
MIPF0001400; mir-3943


Sequence

cacagacggcagcugcggccUAGCCCCCAGGCUUCACUUGGCGuggacaacuugcuaaguaaaguggggggugggccacggcuggcuccuaccuggacaggccuccagcuaa
....((.(.((((((.((((((.(((((..((((.((((((((.(.....).)))))))).))))))))).)))))).)))))).)))....(((((......)))))....

Structure
--------------------caca  c g      c      G     AG    C        u g 
                        ga g cagcug ggccUA CCCCC  GCUU ACUUGGCG g a
                        || | |||||| |||||| |||||  |||| |||||||| | c
                        cu c gucggc ccgggu ggggg  ugaa ugaaucgu c a
aaucgaccuccggacagguccauc  - g      a      g     --    a        u a 


Annotation confidence Not enough data
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Genome context
chr7: 43727230-43727341 [+]

Database links

Mature ggo-miR-3943

Accession MIMAT0024210
Description Gorilla gorilla ggo-miR-3943 mature miRNA
Sequence 21 - UAGCCCCCAGGCUUCACUUGGCG - 43
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116