Stem-loop ggo-mir-1271

Accession

MI0020739

Description

Gorilla gorilla ggo-mir-1271 precursor miRNA

Gene family

MIPF0000483; mir-1271

Sequence

ccgcagcacccagaucagugCUUGGCACCUAGCAAGCACUCAguaaauacuuguugagugccugcuaugugccaggcauugugcugagggcuuuguggggauucagagg
(((((((.(((((..(((((((((((((.(((((.(((((((((((....))))))))))).))))).)))))))))))))..))).))))..)))))...........

Structure

-----------     --  a  -   au             C     A           a 
           ccgca  gc cc cag  cagugCUUGGCAC UAGCA GCACUCAguaa u
           |||||  || || |||  ||||||||||||| ||||| |||||||||||  
           ggugu  cg gg guc  guuacggaccgug aucgu cgugaguuguu a
ggagacuuagg     uu  -  a   gu             u     c           c 

Annotation confidence Not enough data

Genome context

chr5: 160454590-160454698 [+]

Mature ggo-miR-1271

• Accession: MIMAT0024192
• Description: Gorilla gorilla ggo-miR-1271 mature miRNA
• Sequence: 21 - CUUGGCACCUAGCAAGCACUCA - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116