miRBase entry: ggo-mir-551b

Stem-loop ggo-mir-551b


Accession
MI0020735
Description
Gorilla gorilla ggo-mir-551b precursor miRNA
Gene family
MIPF0000360; mir-551


Sequence

uagaucugccagaugugcucuccuggcccaugaaaucaagcgugggugagaccuggugcagaacgggaagGCGACCCAUACUUGGUUUCAGaggcugcgagaauaccugc
.........(((..(((.((((.(((((..((((((((((.((((((....((((........))))......)))))).))))))))))..))))).)))).)))))).

Structure
uagaucugc   au   c    c     ca          c      --gaga    gug 
         cag  gug ucuc uggcc  ugaaaucaag gugggu      ccug   c
         |||  ||| |||| |||||  |||||||||| ||||||      ||||    
         guc  cau agag gucgg  ACUUUGGUUC UACCCA      gggc   a
--------c   --   a    c     aG          A      GCGgaa    aag 


Annotation confidence Not enough data
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Genome context
chr3: 171298742-171298851 [+]

Database links

Mature ggo-miR-551b

Accession MIMAT0024188
Description Gorilla gorilla ggo-miR-551b mature miRNA
Sequence 71 - GCGACCCAUACUUGGUUUCAG - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116