Stem-loop ggo-mir-431

Accession

MI0020731

Description

Gorilla gorilla ggo-mir-431 precursor miRNA

Gene family

MIPF0000142; mir-431

Sequence

ggccacacugacgguaacguUGCAGGUCGUCUUGCAGGGCUucucgcaagacgacauccucaucaccaacgacgugcagcuccagguagcgguucugacgcagggcaggga
.((.((.(((..(((.((((((...((((((((((.(((...)))))))))))))..............))))))...))).))))).)).((((((...)))))).....

Structure

--------------------g  c  a   ac   --a      -----------CAG          A   C 
                     gc ac cug  ggu   acguUG              GUCGUCUUGC GGG  
                     || || |||  |||   ||||||              |||||||||| ||| U
                     cg ug gac  ucg   ugcagc              cagcagaacg cuc  
agggacgggacgcagucuugg  a  -   -c   acg      aaccacuacuccua          -   u 

Annotation confidence Not enough data

Genome context

chr14: 84898290-84898400 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from ggo-mir-431

Mature ggo-miR-431

• Accession: MIMAT0024184
• Description: Gorilla gorilla ggo-miR-431 mature miRNA
• Sequence: 21 - UGCAGGUCGUCUUGCAGGGCU - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116