miRBase entry: ggo-mir-656

Stem-loop ggo-mir-656

Accession

MI0020730

Description

Gorilla gorilla ggo-mir-656 precursor miRNA

Gene family

MIPF0000018; mir-154

Sequence

cccuggagucagugcugcucaaugguaccugaaauagguugccugugagguguucacuuucuauaugaugAAUAUUAUACAGUCAACCUCuuuccgauaucgaauccc
.....(((.((....)))))...((((.(.((((.((((((.(((((.((((((((...((.....)))))))))).))))).)))))).)))).).)))).......

Structure

cccuggagucagugcugcucaau    c u    u      c     a        cuu  u 
                       ggua c gaaa agguug cugug gguguuca   uc a
                       |||| | |||| |||||| ||||| ||||||||   || u
                       cuau g cuuu UCCAAC GACAU UUAUAAgu   ag a
----------------cccuaag    a c    C      U     A        ---  u

Annotation confidence Not enough data

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Genome context

chr14: 85089754-85089861 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from ggo-mir-656

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-656

Accession	MIMAT0024183
Description	Gorilla gorilla ggo-miR-656 mature miRNA
Sequence	71 - AAUAUUAUACAGUCAACCUC - 90
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116