miRBase entry: ggo-mir-197

Stem-loop ggo-mir-197


Accession
MI0020727
Description
Gorilla gorilla ggo-mir-197 precursor miRNA
Gene family
MIPF0000123; mir-197


Sequence

ccugcuggaaucugugcucugggggcugugccggguagagagggcagugggagguaagagcucuucacccUUCACCACCUUCUCCACCCAGCauggccggcacacuuugg
((....))....((((((.....((((((((.((((.(((((((..(((((.((((((....))).))).)))))..))))))).)))).))))))))))))))......

Structure
ccugcuggaauc      cuggg        c    a       ca     a   -   a 
            ugugcu     ggcugugc gggu gagaggg  guggg ggu aag g
            ||||||     |||||||| |||| |||||||  ||||| ||| |||  
            acacgg     ccgguaCG CCCA CUCUUCC  CACUU cca uuc c
------gguuuc      -----        A    C       AC     c   c   u 


Annotation confidence Not enough data
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Genome context
chr1: 110985977-110986086 [+]

Database links

Mature ggo-miR-197

Accession MIMAT0024180
Description Gorilla gorilla ggo-miR-197 mature miRNA
Sequence 71 - UUCACCACCUUCUCCACCCAGC - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116