miRBase entry: ggo-mir-142

Stem-loop ggo-mir-142


Accession
MI0020724
Description
Gorilla gorilla ggo-mir-142 precursor miRNA
Gene family
MIPF0000084; mir-142


Sequence

acagacagacagugcagucaCCCAUAAAGUAGAAAGCACUAcuaacagcacuggaggguguaguguuuccuacuuuauggaugaguguacugugggcuucggagaucacgc
..((.(..((((((((.(((.(((((((((((.(((((((((...(..(....)..)..))))))))).))))))))))).))).))))))))..))).............

Structure
-----------ac  a ag        g   C           A         uaa ag a 
             ag c  acagugca uca CCAUAAAGUAG AAGCACUAc   c  c c
             || |  |||||||| ||| ||||||||||| |||||||||   |  |  
             uc g  ugucaugu agu gguauuucauc uuugugaug   g  g u
cgcacuagaggcu  - gg        g   a           c         -ug ga g 


Annotation confidence Not enough data
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Genome context
chr5: 25044891-25045001 [+]

Database links

Mature ggo-miR-142

Accession MIMAT0024177
Description Gorilla gorilla ggo-miR-142 mature miRNA
Sequence 21 - CCCAUAAAGUAGAAAGCACUA - 41
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116