miRBase entry: ggo-mir-323b

Stem-loop ggo-mir-323b


Accession
MI0020718
Description
Gorilla gorilla ggo-mir-323b precursor miRNA
Gene family
MIPF0000018; mir-154


Sequence

cugcgagcagugccaccucgugguacucggagggagguuguccguggugaguucgcauuauuuaaugaugCCCAAUACACGGUCGACCUCuuuucgguaucagaucuc
........((((((((...))))))))(((((((((((((.(((((........(((((((...)))))))......))))).)))))))))))))............

Structure
cugcgagcagugccaccucgugguacu             u     gugaguuc       u 
                           cggagggagguug ccgug        gcauuau  
                           ||||||||||||| |||||        ||||||| u
                           gcuuuuCUCCAGC GGCAC        Cguagua  
---------------cucuagacuaug             U     --AUAACC       a 


Annotation confidence Not enough data
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Genome context
chr14: 85079231-85079338 [+]
Clustered miRNAs
16 other miRNAs are < 10 kb from ggo-mir-323b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ggo-miR-323b

Accession MIMAT0024171
Description Gorilla gorilla ggo-miR-323b mature miRNA
Sequence 71 - CCCAAUACACGGUCGACCUC - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116