miRBase entry: ggo-mir-421

Stem-loop ggo-mir-421


Accession
MI0020715
Description
Gorilla gorilla ggo-mir-421 precursor miRNA
Gene family
MIPF0000098; mir-95


Sequence

guauucacagugccuaauccggugcacauuguaggccucauuaaauguuuguugaaugaaaaaaugaaucAUCAACAGACAUUAAUUGGGCGccugcucugugaucuccaug
....((((((((((......))))).....((((((((((...((((((((((((.(((.........)))))))))))))))...)))).))))))..)))))........

Structure
----guau     gugccuaauccggugcacauu      -    uua            a   aaa 
        ucaca                     guaggc cuca   aauguuuguuga uga   a
        |||||                     |||||| ||||   |||||||||||| |||   a
        agugu                     cguccG GGGU   UUACAGACAACU Acu   u
guaccucu     -------------------cu      C    UAA            -   aag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrX: 73853261-73853372 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ggo-mir-421
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ggo-miR-421

Accession MIMAT0024168
Description Gorilla gorilla ggo-miR-421 mature miRNA
Sequence 71 - AUCAACAGACAUUAAUUGGGCG - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116