miRBase entry: ggo-mir-328

Stem-loop ggo-mir-328


Accession
MI0020713
Description
Gorilla gorilla ggo-mir-328 precursor miRNA
Gene family
MIPF0000203; mir-328


Sequence

aaguccugggcugucucagagccuggagugggggggcaggaggggcucagggagaaagugcauacagcccCUGGCCCUCUCUGCCCUUCCGuccccugcucuuggccaugc
........(((((....(((((..(((.((((((((((((.(((((.(((((.......((.....)))))))))))).)))))))))))))))...))))))))))....

Structure
aaguccug     ucuc     -cu   g            a     u     agaaagu  a 
        ggcug    agagc   gga ugggggggcagg ggggc caggg       gc u
        |||||    |||||   ||| |||||||||||| ||||| |||||       || a
        ccggu    ucucg   ccu GCCUUCCCGUCU UCCCG GUCcc       cg c
----cgua     ----     ucc   -            C     -     -------  a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr16: 58294087-58294197 [-]

Database links

Mature ggo-miR-328

Accession MIMAT0024166
Description Gorilla gorilla ggo-miR-328 mature miRNA
Sequence 71 - CUGGCCCUCUCUGCCCUUCCG - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116