Stem-loop ggo-mir-660

Accession

MI0020711

Description

Gorilla gorilla ggo-mir-660 precursor miRNA

Gene family

MIPF0000113; mir-188

Sequence

augaacugcuccuucucccaUACCCAUUGCAUAUCGGAGUUGugaauucucaaaacaccuccugugugcauggauuacaggagggugagccuugucaucgugaaucuucu
((((...((((.((((((.....((((.((((((.((((.(((...........))).)))).))))))))))......)))))).))))....))))............

Structure

------------    -acu    c      -caUAC    U      C    U   gaau 
            auga    gcuc uucucc      CCAU GCAUAU GGAG UGu    u
            ||||    |||| ||||||      |||| |||||| |||| |||    c
            uacu    cgag gggagg      ggua cgugug ccuc aca    u
ucuucuaagugc    guuc    u      acauua    -      u    c   aaac 

Annotation confidence Not enough data

Genome context

chrX: 50447197-50447306 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from ggo-mir-660

Mature ggo-miR-660

• Accession: MIMAT0024164
• Description: Gorilla gorilla ggo-miR-660 mature miRNA
• Sequence: 21 - UACCCAUUGCAUAUCGGAGUUG - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116