miRBase entry: ggo-mir-130b

Stem-loop ggo-mir-130b


Accession
MI0020703
Description
Gorilla gorilla ggo-mir-130b precursor miRNA
Gene family
MIPF0000034; mir-130


Sequence

cccugggggaggcacuggcaggccugcccgacacucuuucccuguugcacuacuaugggccgcugggaagCAGUGCAAUGAUGAAAGGGCAucggucagguccggccugc
(((...)))..(((..(((.((((((.((((..(((((((..(((((((((..........(((....))))))))))))..)))))))..)))).))))))..))))))

Structure
cccugggggag   cu   -a      c    ca       cc         acuaugggcc   g 
           gca  ggc  ggccug ccga  cucuuuc  uguugcacu          gcu g
           |||  |||  |||||| ||||  |||||||  |||||||||          |||  
           cgu  ccg  cuggac ggcu  GGGAAAG  GUAACGUGA          Cga g
-----------   --   gc      u    AC       UA         ----------   a 


Annotation confidence Not enough data
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Genome context
chr22: 5015164-5015273 [+]

Database links

Mature ggo-miR-130b

Accession MIMAT0024156
Description Gorilla gorilla ggo-miR-130b mature miRNA
Sequence 71 - CAGUGCAAUGAUGAAAGGGCA - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116