miRBase entry: ggo-mir-655

Stem-loop ggo-mir-655

Accession

MI0020701

Description

Gorilla gorilla ggo-mir-655 precursor miRNA

Gene family

MIPF0000018; mir-154

Sequence

uucguuucagaacuauucaaggauauuugaggagagguuauccguguuauguucgcuucauucaucaugaAUAAUACAUGGUUAACCUCUUuuugaauaucagacucu
(((......))).........(((((((((((((((((((.((((((..((((((............))))))..)))))).))))))))))))))))))).......

Structure

uucguuucagaacuauucaag                   u      ua      cuuca 
                     gauauuugaggagagguua ccgugu  uguucg     u
                     ||||||||||||||||||| ||||||  ||||||      
                     cuauaaguuuUUCUCCAAU GGUACA  AUAagu     u
--------------ucucaga                   U      UA      acuac

Annotation confidence Not enough data

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Genome context

chr14: 85072564-85072671 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from ggo-mir-655

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-655

Accession	MIMAT0024154
Description	Gorilla gorilla ggo-miR-655 mature miRNA
Sequence	71 - AUAAUACAUGGUUAACCUCUU - 91
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116