Stem-loop ggo-mir-424

Accession

MI0020698

Description

Gorilla gorilla ggo-mir-424 precursor miRNA

Gene family

MIPF0000164; mir-322

Literature search

1 open access papers mention ggo-mir-424
(1 sentences)

Sequence

ucauugacuccgaggggauaCAGCAGCAAUUCAUGUUUUGAaguguucuaaaugguucaaaacgugaggcgcugcuauacccccucguggggaagguagaagguggggucu
(((((..((((((((((.((.((((((..(((((((((((((.((((...)))).)))))))))))))..)))))).)).))))))).)))...))).))...........

Structure

-----------  -   -ga   -       a  C      AA             g    c 
           uc auu   cuc cgagggg ua AGCAGC  UUCAUGUUUUGAa uguu  
           || |||   ||| ||||||| || ||||||  ||||||||||||| |||| u
           ag ugg   ggg gcucccc au ucgucg  gagugcaaaacuu guaa  
ucuggggugga  a   aag   u       c  a      cg             g    a 

Annotation confidence Not enough data

Genome context

chrX: 134602008-134602118 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from ggo-mir-424

Mature ggo-miR-424

• Accession: MIMAT0024151
• Description: Gorilla gorilla ggo-miR-424 mature miRNA
• Sequence: 21 - CAGCAGCAAUUCAUGUUUUGA - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116